set number-of-male-nodes 400
set acute-duration 3
set initial-percent-infected 0.15
set treatment-threshold 200
set proportion-on-treatment 0
set chronic-infectivity 0.019
set treatment-infectivity-ratio 0.1
set final-infectivity-ratio 4
set acute-infectivity-ratio 8
set MtoF-ratio 2
set outside-death-rate 0.006 / 12

set relative-coital-freq [1 1] ;for n=2,3 partners (per partner, compared to 1 partner)
set ever-married-pos-choose-polygamous-odds 1
set ever-married-neg-choose-polygamous-odds 1
set sero-sorting-odds 1
set male-remarry-pos-odds 1
set female-remarry-pos-odds 1
set F+M-divorce-odds 1
set F-M+divorce-odds 1

; states
set R [[0	0][0	1][0	2][0	3][1	0][1	1][1	2]]

; Zambia
; Age Pyramid [age bracket males females (as percent of total males / females)]
set Pyramid [[15 19 .2382 .2345] [20 24 .2055 .2016] [25 29 .18 .1775] [30 34 .1434 .1444] [35 39 .1031 .1077] [40 44 .0728 .077] [45 49 .0574 .0574]]

; Incidence
;; This is for the distribution of how long ago 
;; people got infected
set t-hat-probs [ 0.10632664 0.10508874 0.10232211 0.09792300 0.09196443 0.08465179 0.07629248 0.06726117 0.05796102 0.04878451 0.04007881 0.03211952 0.02509562 0.01910601 0.01416667 0.01022552 0.00718169 0.00490575 0.00325794 0.00210265 0.00131829 0.00080261 0.00047434 0.00027202 0.00015130 0.00008159 0.00004263 0.00002157 0.00001056 0.00000500 0.00000229 0.00000101 0.00000043 0.00000018 0.00000007 0.00000003 0.00000001 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000 0.00000000]
set t-hat [ 0.50000000 1.50000000 2.50000000 3.50000000 4.50000000 5.50000000 6.50000000 7.50000000 8.50000000 9.50000000 10.50000000 11.50000000 12.50000000 13.50000000 14.50000000 15.50000000 16.50000000 17.50000000 18.50000000 19.50000000 20.50000000 21.50000000 22.50000000 23.50000000 24.50000000 25.50000000 26.50000000 27.50000000 28.50000000 29.50000000 30.50000000 31.50000000 32.50000000 33.50000000 34.50000000 35.50000000 36.50000000 37.50000000 38.50000000 39.50000000 40.50000000 41.50000000 42.50000000 43.50000000 44.50000000 45.50000000 46.50000000 47.50000000 48.50000000 49.50000000]
